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  5. Sobic.003G216166.1

Sobic.003G216166.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G216166.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
115821 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
173584 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
235359 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
412710 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.05 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.04 Orthogroups_2024-Update
A4A49_09054 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_10347 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_13046 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_33262 No alias abc transporter g family member 32 0.03 Orthogroups_2024-Update
A4A49_38659 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
At1g15520 No alias ABC transporter G family member 40... 0.05 Orthogroups_2024-Update
At4g15230 No alias ABC transporter G family member 30... 0.03 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.06 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.08 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
Bradi3g34890 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Brara.A03065.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.F01068.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.G01592.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Cre01.g007000 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
Cre04.g224400 No alias pleiotropic drug resistance 7 0.01 Orthogroups_2024-Update
GRMZM2G014282 No alias pleiotropic drug resistance 9 0.02 Orthogroups_2024-Update
GRMZM2G118243 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
GRMZM2G421495 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.04G069800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.06G071800 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.13G355000 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Glyma.18G063400 No alias pleiotropic drug resistance 3 0.04 Orthogroups_2024-Update
HORVU3Hr1G022800.1 No alias cuticular lipid exporter *(PEC1) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.08 Orthogroups_2024-Update
HORVU5Hr1G049490.3 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
HORVU7Hr1G092510.2 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Kfl00175_0190 kfl00175_0190_v1.1 (at2g29940 : 809.0) pleiotropic drug resistance 3... 0.02 Orthogroups_2024-Update
Kfl00361_0030 kfl00361_0030_v1.1 (q5z9s8|pdr12_orysa : 1282.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g29570 No alias pleiotropic drug resistance protein 3, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g13720 No alias Plant PDR ABC transporter associated domain containing... 0.03 Orthogroups_2024-Update
MA_10425791g0020 No alias (q8gu88|pdr7_orysa : 1086.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.04 Orthogroups_2024-Update
MA_10427561g0010 No alias (q8gu88|pdr7_orysa : 1276.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.06 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.06 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.03 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.06 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.06 Orthogroups_2024-Update
PSME_00015316-RA No alias (q2pcf1|pdr2_nicpl : 1867.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.07 Orthogroups_2024-Update
PSME_00015447-RA No alias (at1g15210 : 1560.0) pleiotropic drug resistance 7... 0.03 Orthogroups_2024-Update
Potri.001G049000 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Potri.001G189500 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Potri.003G179000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.2G335300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.08 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.5G221600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.004G087700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc08g067620 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100190 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g032100 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen05g032130 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen11g003170 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen11g003190 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
evm.model.tig00021489.3 No alias (at3g21090 : 172.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 15 167
IPR013525 ABC_2_trans 312 526
No external refs found!