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  5. Sobic.003G220800.1

Sobic.003G220800.1


Description : Unknown function


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G220800.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G201300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Kfl00591_0060 kfl00591_0060_v1.1 (at4g26650 : 192.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 16 81
IPR000504 RRM_dom 104 170
No external refs found!