Sobic.003G223800.2


Description : GABA transporter *(GAT) & gamma-aminobutyric acid transporter *(GAT)


Gene families : OG_42_0005977 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005977_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G223800.2
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
PSME_00049192-RA No alias (at5g41800 : 432.0) Transmembrane amino acid transporter... 0.03 Orthogroups_2024-Update
Sobic.009G250200.1 No alias GABA transporter *(GAT) & gamma-aminobutyric acid... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 1 365
No external refs found!