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  5. Sobic.003G224100.1

Sobic.003G224100.1


Description : jasmonoyl-amino acid synthetase *(JAR1)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G224100.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.02 Orthogroups_2024-Update
Bradi1g18200 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Brara.C01348.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Brara.F00408.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F00702.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G061005 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Glyma.07G057900 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
PSME_00049441-RA No alias (at5g54510 : 883.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
Seita.9G358800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.06 Orthogroups_2024-Update
Solyc02g092820 No alias IAA-amido synthetase 3-4 0.03 Orthogroups_2024-Update
Solyc05g050280 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 12 558
No external refs found!