Description : uroporphyrinogen III decarboxylase *(HEME) & EC_4.1 carbon-carbon lyase
Gene families : OG_42_0002394 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002394_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.003G225100.1 | |
Cluster | HCAA Clusters: Cluster_129 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g63087 | No alias | Uroporphyrinogen decarboxylase | 0.04 | Orthogroups_2024-Update | |
Bradi2g43900 | No alias | Uroporphyrinogen decarboxylase | 0.06 | Orthogroups_2024-Update | |
GRMZM2G044074 | No alias | Uroporphyrinogen decarboxylase | 0.05 | Orthogroups_2024-Update | |
HORVU3Hr1G055700.1 | No alias | uroporphyrinogen III decarboxylase *(HEME) & EC_4.1... | 0.04 | Orthogroups_2024-Update | |
Potri.019G048900 | No alias | Uroporphyrinogen decarboxylase | 0.02 | Orthogroups_2024-Update | |
Seita.9G411900.1 | No alias | uroporphyrinogen III decarboxylase *(HEME) & EC_4.1... | 0.03 | Orthogroups_2024-Update | |
Sopen10g003130 | No alias | Uroporphyrinogen decarboxylase (URO-D) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEA | 16Dec |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006353 | DNA-templated transcription, termination | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000257 | Uroporphyrinogen_deCOase | 49 | 385 |
No external refs found! |