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  5. Sobic.003G232800.1

Sobic.003G232800.1


Description : Unknown function


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G232800.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_08988 No alias transcription factor myb21 0.03 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.03 Orthogroups_2024-Update
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.02 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.02 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.02 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.04 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C00533.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.F02448.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre02.g108350 No alias myb domain protein 1 0.02 Orthogroups_2024-Update
GRMZM2G015021 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G124715 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.06G300200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.07G235900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Glyma.08G317800 No alias myb domain protein 97 0.01 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.12G218200 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Glyma.15G144000 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Glyma.19G055800 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Glyma.19G184500 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Glyma.20G184200 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
HORVU0Hr1G006810.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G103970.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G057410.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g19330 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g35660 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00021697-RA No alias (at5g15310 : 302.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.02 Orthogroups_2024-Update
PSME_00031964-RA No alias (at4g13480 : 184.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.01 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00050182-RA No alias (p10290|mybc_maize : 191.0) Anthocyanin regulatory C1... 0.02 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Potri.006G123400 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.006G170800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.010G141000 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.010G174500 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.011G041600 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.01 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G239300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G204400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G404400.2 No alias transcriptional regulator *(TDF1) & MYB class-R2R3... 0.02 Orthogroups_2024-Update
Sobic.002G209300.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G132600.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G055700.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Solyc02g082040 No alias R2R3MYB transcription factor 56 0.02 Orthogroups_2024-Update
Solyc02g086690 No alias Myb-related protein (AHRD V3.3 *-* A0A0B0P535_GOSAR) 0.02 Orthogroups_2024-Update
Solyc07g008010 No alias R2R3MYB transcription factor 82 0.02 Orthogroups_2024-Update
Solyc11g069030 No alias blind 0.02 Orthogroups_2024-Update
Sopen01g006750 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen10g032000 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 77 120
IPR001005 SANT/Myb 24 71
No external refs found!