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  5. Sobic.003G236150.1

Sobic.003G236150.1


Description : Unknown function


Gene families : OG_42_0011426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G236150.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Bradi2g58480 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g68524 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G425100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G399100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g111430 No alias LOW QUALITY:Pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 285
IPR002885 Pentatricopeptide_repeat 341 378
No external refs found!