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  5. Sobic.003G238400.1

Sobic.003G238400.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G238400.1
Cluster HCAA Clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Brara.E03635.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03218.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
Kfl00071_0290 kfl00071_0290_v1.1 (at5g46550 : 105.0) DNA-binding bromodomain-containing... 0.02 Orthogroups_2024-Update
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 63 147
No external refs found!