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  5. Sobic.003G240000.1

Sobic.003G240000.1


Description : regulatory mediator of IRE1-bZIP60 UPR pathway


Gene families : OG_42_0000291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G240000.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Sopen00g008360 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update
Sopen01g044250 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 21 133
No external refs found!