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  5. Sobic.003G242200.1

Sobic.003G242200.1


Description : clade A phosphatase


Gene families : OG_42_0000303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G242200.1
Cluster HCAA Clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Bradi2g45470 No alias highly ABA-induced PP2C gene 3 0.02 Orthogroups_2024-Update
GRMZM2G001243 No alias homology to ABI1 0.02 Orthogroups_2024-Update
LOC_Os09g15670 No alias protein phosphatase 2C, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00003875-RA No alias (at5g59220 : 245.0) highly ABA-induced PP2C gene 1... 0.01 Orthogroups_2024-Update
Sopen05g031500 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 196 452
No external refs found!