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  5. Sobic.003G243600.1

Sobic.003G243600.1


Description : E2 MUB ubiquitin-conjugating enzyme


Gene families : OG_42_0000236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G243600.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
At1g64230 No alias Ubiquitin-conjugating enzyme 28... 0.04 Orthogroups_2024-Update
At3g24515 No alias Ubiquitin-conjugating enzyme 37... 0.02 Orthogroups_2024-Update
Bradi2g45550 No alias ubiquitin conjugating enzyme 9 0.03 Orthogroups_2024-Update
Brara.A01770.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Brara.C04161.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.06 Orthogroups_2024-Update
Brara.G00309.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
GRMZM5G814314 No alias ubiquitin conjugating enzyme 9 0.05 Orthogroups_2024-Update
Glyma.12G032800 No alias ubiquitin-conjugating enzyme 10 0.03 Orthogroups_2024-Update
Potri.006G110200 No alias ubiquitin conjugating enzyme 8 0.07 Orthogroups_2024-Update
Potri.012G033000 No alias ubiquitin-conjugating enzyme 10 0.05 Orthogroups_2024-Update
Seita.3G203000.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Seita.5G250800.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.09 Orthogroups_2024-Update
Solyc05g050230 No alias Ubiquitin conjugating enzyme E2 (AHRD V3.3 *** A5YVL3_ADICA) 0.06 Orthogroups_2024-Update
Sopen01g039240 No alias Ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Sopen03g003420 No alias Ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Sopen05g028680 No alias Ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Sopen08g004070 No alias Ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!