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  5. Sobic.003G245700.1

Sobic.003G245700.1


Description : Unknown function


Gene families : OG_42_0000433 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G245700.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
At3g62320 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.03 Orthogroups_2024-Update
At5g48350 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9LK79] 0.03 Orthogroups_2024-Update
Bradi2g45650 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.04 Orthogroups_2024-Update
Brara.I04307.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G111436 No alias Werner syndrome-like exonuclease 0.02 Orthogroups_2024-Update
LOC_Os01g47180 No alias 3-5 exonuclease domain-containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g02150 No alias 3-5 exonuclease domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.016G028700 No alias Werner syndrome-like exonuclease 0.03 Orthogroups_2024-Update
Seita.2G004100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc08g007350 No alias LOW QUALITY:Werner Syndrome-like exonuclease (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g094540 No alias LOW QUALITY:Werner Syndrome-like exonuclease (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
BP GO:0006139 nucleobase-containing compound metabolic process IEA 16Dec
MF GO:0008408 3'-5' exonuclease activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002562 3'-5'_exonuclease_dom 29 197
No external refs found!