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  5. Sobic.003G249400.1

Sobic.003G249400.1


Description : Unknown function


Gene families : OG_42_0007965 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G249400.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Bradi2g45970 No alias Function unknown 0.04 Orthogroups_2024-Update
Brara.D02601.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G024391 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.14G029700 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU3Hr1G060730.2 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os01g47630 No alias expressed protein 0.08 Orthogroups_2024-Update
Mp4g07870.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Potri.002G058000 No alias Function unknown 0.06 Orthogroups_2024-Update
Pp1s182_27V6 No alias unknown [Picea sitchensis] 0.04 Orthogroups_2024-Update
Seita.5G262300.1 No alias Unknown function 0.14 Orthogroups_2024-Update
Solyc07g056240 No alias TRNA-methyltransferase (AHRD V3.3 *** A0A061DM84_THECC) 0.05 Orthogroups_2024-Update
Sopen07g029600 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!