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  5. Sobic.003G250340.1

Sobic.003G250340.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G250340.1
Cluster HCAA Clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
A4A49_29337 No alias ras-related protein raba3 0.01 Orthogroups_2024-Update
At4g39990 No alias Ras-related protein RABA4b... 0.05 Orthogroups_2024-Update
Brara.C01723.1 No alias A-class RAB GTPase 0.01 Orthogroups_2024-Update
Brara.H02491.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
GRMZM2G020544 No alias RAB GTPase 11C 0.02 Orthogroups_2024-Update
GRMZM2G127648 No alias RAB GTPase homolog A1B 0.03 Orthogroups_2024-Update
GRMZM2G144008 No alias RAB GTPase homolog A2B 0.03 Orthogroups_2024-Update
Glyma.02G252000 No alias RAB GTPase homolog A2B 0.02 Orthogroups_2024-Update
Sopen01g039980 No alias Ras family 0.02 Orthogroups_2024-Update
Sopen05g031410 No alias Ras family 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 16 176
No external refs found!