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  5. Sobic.003G262500.1

Sobic.003G262500.1


Description : protein de-S-acylation enzyme *(ABAPT)


Gene families : OG_42_0000456 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G262500.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
A4A49_00552 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_16297 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_23677 No alias hypothetical protein 0.07 Orthogroups_2024-Update
A4A49_24986 No alias hypothetical protein 0.05 Orthogroups_2024-Update
At1g66900 No alias Alpha/beta-Hydrolases superfamily protein... 0.05 Orthogroups_2024-Update
Bradi3g54130 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G179658 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
PSME_00019341-RA No alias (at4g31020 : 259.0) alpha/beta-Hydrolases superfamily... 0.01 Orthogroups_2024-Update
Seita.1G055000.1 No alias protein de-S-acylation enzyme *(ABAPT) 0.04 Orthogroups_2024-Update
Seita.1G351400.1 No alias protein de-S-acylation enzyme *(ABAPT) 0.03 Orthogroups_2024-Update
Seita.3G310000.1 No alias protein de-S-acylation enzyme *(ABAPT) 0.04 Orthogroups_2024-Update
Solyc02g065700 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g034270 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g015920 No alias Alpha/beta hydrolase family 0.03 Orthogroups_2024-Update
Sopen02g030900 No alias Alpha/beta hydrolase family 0.03 Orthogroups_2024-Update
Sopen03g030880 No alias Alpha/beta hydrolase family 0.04 Orthogroups_2024-Update
Sopen07g001270 No alias Alpha/beta hydrolase family 0.02 Orthogroups_2024-Update
evm.model.contig_2016.7 No alias (at3g30380 : 140.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR022742 Hydrolase_4 97 204
No external refs found!