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  5. Sobic.003G267100.1

Sobic.003G267100.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G267100.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Brara.F03152.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Mp7g16060.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Pp1s30_121V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Pp1s38_321V6 No alias multidrug pheromone mdr abc transporter family 0.03 Orthogroups_2024-Update
Seita.5G283700.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.004G274600.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 710 983
IPR011527 ABC1_TM_dom 58 330
IPR003439 ABC_transporter-like 1050 1200
IPR003439 ABC_transporter-like 397 546
No external refs found!