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  5. Sobic.003G272200.1

Sobic.003G272200.1


Description : bHLH-type transcription factor


Gene families : OG_42_0002673 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G272200.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_15672 No alias transcription factor bhlh13 0.05 Orthogroups_2024-Update
Brara.C04496.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Seita.5G288300.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 337 383
IPR025610 MYC/MYB_N 44 236
No external refs found!