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  5. Sobic.003G272500.1

Sobic.003G272500.1


Description : component *(eL28) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0002199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G272500.1
Cluster HCAA Clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
A4A49_23451 No alias 60s ribosomal protein l28-1 0.03 Orthogroups_2024-Update
A4A49_64591 No alias 60s ribosomal protein l28-1 0.03 Orthogroups_2024-Update
Bradi2g18150 No alias Ribosomal L28e protein family 0.02 Orthogroups_2024-Update
Bradi2g47760 No alias Ribosomal L28e protein family 0.02 Orthogroups_2024-Update
Brara.A00789.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.H01443.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.I01133.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.I04724.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre11.g467578 No alias Ribosomal L28e protein family 0.04 Orthogroups_2024-Update
HORVU3Hr1G066430.3 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Kfl00166_0150 kfl00166_0150_v1.1 (at4g29410 : 108.0) Ribosomal L28e protein family;... 0.06 Orthogroups_2024-Update
LOC_Os01g51020 No alias 60S ribosomal protein L28-1, putative, expressed 0.03 Orthogroups_2024-Update
MA_10428490g0010 No alias (at2g19730 : 181.0) Ribosomal L28e protein family;... 0.05 Orthogroups_2024-Update
Mp1g26940.1 No alias component RPL28 of LSU proteome component 0.05 Orthogroups_2024-Update
PSME_00007702-RA No alias (at2g19730 : 186.0) Ribosomal L28e protein family;... 0.02 Orthogroups_2024-Update
Potri.001G194000 No alias Ribosomal L28e protein family 0.04 Orthogroups_2024-Update
Pp1s505_8V6 No alias 60s ribosomal protein l28 0.03 Orthogroups_2024-Update
Seita.5G288600.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.009G215200.2 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc03g121330 No alias 60S ribosomal protein L28, putative (AHRD V3.3 *** B9RKC5_RICCO) 0.02 Orthogroups_2024-Update
Sopen03g040140 No alias Ribosomal L28e protein family 0.04 Orthogroups_2024-Update
Sopen12g022910 No alias Ribosomal L28e protein family 0.02 Orthogroups_2024-Update
evm.model.contig_471.3 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 8 129
No external refs found!