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  5. Sobic.003G276500.1

Sobic.003G276500.1


Description : voltage-gated anion channel *(VDAC)


Gene families : OG_42_0000558 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G276500.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
At5g67500 No alias voltage dependent anion channel 2 [Source:TAIR;Acc:AT5G67500] 0.03 Orthogroups_2024-Update
GRMZM2G146670 No alias voltage dependent anion channel 1 0.03 Orthogroups_2024-Update
Potri.014G016300 No alias voltage dependent anion channel 2 0.03 Orthogroups_2024-Update
Seita.5G295200.1 No alias voltage-gated anion channel *(VDAC) 0.04 Orthogroups_2024-Update
Solyc07g008350 No alias voltage-dependent anion channel protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
BP GO:0000726 non-recombinational repair IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 2 269
No external refs found!