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  5. Sobic.003G280000.1

Sobic.003G280000.1


Description : MYB class-R2R3 subgroup-14 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G280000.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.02 Orthogroups_2024-Update
A4A49_31927 No alias transcription repressor myb4 0.02 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
At1g25340 No alias myb domain protein 116 [Source:TAIR;Acc:AT1G25340] 0.03 Orthogroups_2024-Update
At3g13890 No alias Transcription factor MYB26... 0.04 Orthogroups_2024-Update
At5g35550 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00351.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.07G038000 No alias myb domain protein 4 0.01 Orthogroups_2024-Update
Glyma.08G017600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.04 Orthogroups_2024-Update
HORVU2Hr1G087990.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G092820.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G058630.3 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G037060.3 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g29614 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g14670 No alias ODORANT1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g35660 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00010774-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.01 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.02 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.010G165700 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.01 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G307500.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.01 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G368500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G145100.2 No alias MYB class-R2R3 subgroup-7 transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Solyc01g057910 No alias R2R3MYB transcription factor 2 0.02 Orthogroups_2024-Update
Solyc04g074170 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI) 0.02 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 62
IPR001005 SANT/Myb 69 111
No external refs found!