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  5. Sobic.003G280600.1

Sobic.003G280600.1


Description : Unknown function


Gene families : OG_42_0000682 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G280600.1
Cluster HCAA Clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G078200 No alias Senescence/dehydration-associated protein-related 0.03 Orthogroups_2024-Update
PSME_00003384-RA No alias (at4g15450 : 259.0) Senescence/dehydration-associated... 0.04 Orthogroups_2024-Update
PSME_00038570-RA No alias (at2g17840 : 140.0) Identified as drought-inducible gene... 0.02 Orthogroups_2024-Update
Sopen12g003410 No alias Senescence-associated protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
InterPro domains Description Start Stop
IPR009686 Senescence/spartin 174 410
No external refs found!