Sobic.003G281500.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G281500.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
417263 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Cre11.g467597 No alias pleiotropic drug resistance 10 0.01 Orthogroups_2024-Update
Cre12.g540650 No alias pleiotropic drug resistance 3 0.01 Orthogroups_2024-Update
Cre16.g648700 No alias pleiotropic drug resistance 5 0.01 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Sopen05g032110 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 101 161
IPR003439 ABC_transporter-like 909 1060
IPR003439 ABC_transporter-like 186 366
IPR013581 PDR_assoc 737 799
IPR013525 ABC_2_trans 520 731
IPR013525 ABC_2_trans 1206 1419
No external refs found!