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  5. Sobic.003G287000.1

Sobic.003G287000.1


Description : Unknown function


Gene families : OG_42_0000366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G287000.1
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_03681 No alias burp domain protein rd22 0.03 Orthogroups_2024-Update
Bradi2g49000 No alias BURP domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.12G044600 No alias unknown seed protein like 1 0.04 Orthogroups_2024-Update
LOC_Os05g12410 No alias BURP domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g12640 No alias BURP domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10429742g0010 No alias (at1g70370 : 87.4) polygalacturonase 2 (PG2); FUNCTIONS... 0.02 Orthogroups_2024-Update
MA_161552g0010 No alias (at5g25610 : 95.1) responsive to dehydration 22 (RD22)... 0.05 Orthogroups_2024-Update
PSME_00019471-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00025222-RA No alias (at5g25610 : 92.4) responsive to dehydration 22 (RD22)... 0.02 Orthogroups_2024-Update
PSME_00040212-RA No alias (at1g70370 : 99.4) polygalacturonase 2 (PG2); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00044796-RA No alias (at5g25610 : 120.0) responsive to dehydration 22 (RD22)... 0.03 Orthogroups_2024-Update
Potri.009G114300 No alias unknown seed protein like 1 0.03 Orthogroups_2024-Update
Pp1s298_14V6 No alias Polygalacturonase non-catalytic subunit AroGP3 precursor... 0.03 Orthogroups_2024-Update
Seita.8G155200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G157700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g051660 No alias BURP domain 0.02 Orthogroups_2024-Update
Sopen01g051690 No alias BURP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 283 499
No external refs found!