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  5. Sobic.003G301700.1

Sobic.003G301700.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G301700.1

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
A4A49_32286 No alias cyclic dof factor 2 0.02 Orthogroups_2024-Update
At1g07640 No alias Dof-type zinc finger DNA-binding family protein... 0.02 Orthogroups_2024-Update
Bradi1g73710 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Bradi3g29940 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Brara.A00104.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.H01965.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Glyma.05G037800 No alias Dof-type zinc finger DNA-binding family protein 0.06 Orthogroups_2024-Update
Glyma.06G206400 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Glyma.13G237600 No alias TARGET OF MONOPTEROS 6 0.04 Orthogroups_2024-Update
Glyma.15G076000 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G076800.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
HORVU4Hr1G013890.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
MA_17614g0010 No alias (at5g62940 : 138.0) HCA2 induces the formation of... 0.05 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.04 Orthogroups_2024-Update
PSME_00052342-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.04 Orthogroups_2024-Update
Potri.002G129600 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Potri.005G149100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Pp1s169_171V6 No alias cycling dof factor 2 0.02 Orthogroups_2024-Update
Pp1s69_113V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Seita.1G290700.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.2G242400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.002G236600.2 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.003G033500.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.006G182300.1 No alias transcription factor *(DOF) 0.07 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.02 Orthogroups_2024-Update
Sopen02g032780 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen03g022580 No alias Dof domain, zinc finger 0.05 Orthogroups_2024-Update
Sopen06g027770 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 144 197
No external refs found!