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  5. Sobic.003G304200.1

Sobic.003G304200.1


Description : Patatin-type lipase


Gene families : OG_42_0002589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G304200.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi1g04310 No alias Patatin-like phospholipase family protein 0.03 Orthogroups_2024-Update
Bradi2g50610 No alias Patatin-like phospholipase family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G073710.2 No alias Patatin-type lipase 0.03 Orthogroups_2024-Update
Mp4g10510.1 No alias Patatin-type lipase 0.02 Orthogroups_2024-Update
Potri.016G041000 No alias Patatin-like phospholipase family protein 0.03 Orthogroups_2024-Update
evm.model.contig_4446.10 No alias (at3g57140 : 165.0) sugar-dependent 1-like (SDP1-LIKE);... 0.02 Orthogroups_2024-Update
evm.model.contig_4458.5 No alias (at5g04040 : 226.0) Encodes a triacylglycerol lipase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEA 16Dec
BP GO:0006629 lipid metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR021771 Triacylglycerol_lipase 92 225
IPR002641 PNPLA_dom 232 389
No external refs found!