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  5. Sobic.003G306100.1

Sobic.003G306100.1


Description : chorismate mutase & EC_5.4 intramolecular transferase


Gene families : OG_42_0002287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G306100.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G061100 No alias chorismate mutase 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G074220.2 No alias chorismate mutase & EC_5.4 intramolecular transferase 0.02 Orthogroups_2024-Update
MA_134613g0010 No alias (at3g29200 : 314.0) L-ascorbate peroxidase; chorismate... 0.03 Orthogroups_2024-Update
Seita.5G328800.1 No alias chorismate mutase & EC_5.4 intramolecular transferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!