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  5. Sobic.003G313300.1

Sobic.003G313300.1


Description : circadian clock repression factor *(TZP)


Gene families : OG_42_0007288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G313300.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Bradi2g51500 No alias zinc knuckle (CCHC-type) family protein 0.05 Orthogroups_2024-Update
Brara.F03796.1 No alias circadian clock repression factor *(TZP) 0.03 Orthogroups_2024-Update
Glyma.01G234600 No alias zinc knuckle (CCHC-type) family protein 0.06 Orthogroups_2024-Update
Glyma.20G205301 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU3Hr1G075820.2 No alias circadian clock repression factor *(TZP) 0.05 Orthogroups_2024-Update
HORVU3Hr1G075830.1 No alias circadian clock repression factor *(TZP) 0.06 Orthogroups_2024-Update
LOC_Os01g56780 No alias plus-3 domain containing protein, expressed 0.05 Orthogroups_2024-Update
Potri.008G162100 No alias zinc knuckle (CCHC-type) family protein 0.06 Orthogroups_2024-Update
Potri.010G076700 No alias zinc knuckle (CCHC-type) family protein 0.04 Orthogroups_2024-Update
Seita.5G337100.1 No alias circadian clock repression factor *(TZP) 0.09 Orthogroups_2024-Update
Solyc09g083390 No alias zinc knuckle (CCHC-type) family protein (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Sopen09g032310 No alias Plus-3 domain 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004343 Plus-3_dom 757 846
No external refs found!