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  5. Sobic.003G317000.1

Sobic.003G317000.1


Description : Unknown function


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G317000.1
Cluster HCAA Clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_24985 No alias root phototropism protein 2 0.04 Orthogroups_2024-Update
A4A49_32094 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
At1g03010 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.05 Orthogroups_2024-Update
At3g08660 No alias Putative BTB/POZ domain-containing protein At3g08660... 0.03 Orthogroups_2024-Update
At5g67440 No alias BTB/POZ domain-containing protein NPY3... 0.03 Orthogroups_2024-Update
Bradi1g62554 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi3g47620 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi4g25900 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi5g23307 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.04 Orthogroups_2024-Update
Brara.G01158.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Brara.J00152.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.04 Orthogroups_2024-Update
GRMZM2G004523 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM2G025880 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G237100 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.05G104000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G069800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G223000 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G080670.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G015480.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G053490.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G097110.7 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g02610 No alias BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
LOC_Os11g02620 No alias BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
MA_7675g0010 No alias (at5g48800 : 618.0) Phototropic-responsive NPH3 family... 0.04 Orthogroups_2024-Update
Potri.007G053200 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Potri.010G223600 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s340_40V6 No alias transposon protein mutator sub-class 0.02 Orthogroups_2024-Update
Pp1s454_11V6 No alias transposon protein mutator sub-class 0.03 Orthogroups_2024-Update
Pp1s67_83V6 No alias protein binding 0.02 Orthogroups_2024-Update
Seita.4G048100.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
Seita.7G018400.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.06 Orthogroups_2024-Update
Sobic.001G168800.2 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sobic.002G204300.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.005G015200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G120000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G145300.3 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sobic.010G066100.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.06 Orthogroups_2024-Update
Solyc05g051580 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc07g043130 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen07g022670 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 218 512
IPR000210 BTB/POZ_dom 27 134
No external refs found!