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  5. Sobic.003G319900.1

Sobic.003G319900.1


Description : indole-3-acetic acid-amido synthetase *(GH3)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G319900.1
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
115497 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
125443 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
416246 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
427552 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
85812 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
99818 No alias Auxin-responsive GH3 family protein 0.01 Orthogroups_2024-Update
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.04 Orthogroups_2024-Update
Bradi1g18200 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.02 Orthogroups_2024-Update
Bradi1g23840 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G125600 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.17G165300 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
LOC_Os05g42150 No alias OsGH3.4 - Probable indole-3-acetic acid-amido... 0.03 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Seita.2G375300.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Seita.8G024800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.04 Orthogroups_2024-Update
Seita.9G358800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.01 Orthogroups_2024-Update
Sopen12g001290 No alias GH3 auxin-responsive promoter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 28 571
No external refs found!