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  5. Sobic.003G324400.2

Sobic.003G324400.2


Description : subgroup ERF-VIII transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G324400.2
Cluster HCAA Clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
A4A49_21979 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.01 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.01 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
A4A49_35008 No alias dehydration-responsive element-binding protein 3 0.01 Orthogroups_2024-Update
A4A49_38093 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.01 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.01 Orthogroups_2024-Update
At1g43160 No alias Ethylene-responsive transcription factor RAP2-6... 0.07 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.05 Orthogroups_2024-Update
Bradi4g35600 No alias C-repeat/DRE binding factor 1 0.02 Orthogroups_2024-Update
Brara.C04525.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.H01575.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.01 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.01 Orthogroups_2024-Update
Brara.J00758.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G016500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G122600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.14G056200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G046300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G060140.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g58420 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g41780 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_446533g0010 No alias (at4g16750 : 126.0) encodes a member of the DREB... 0.01 Orthogroups_2024-Update
PSME_00033041-RA No alias (at5g61600 : 121.0) encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037661-RA No alias (at4g17500 : 149.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00041322-RA No alias (q40476|erf1_tobac : 120.0) Ethylene-responsive... 0.01 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00052064-RA No alias (at5g21960 : 132.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G313500 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Potri.003G077700 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Potri.012G108500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G046800 No alias ethylene-responsive element binding factor 13 0.01 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.01 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.005G014800.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Solyc02g077370 No alias Ethylene Response Factor C.5 0.02 Orthogroups_2024-Update
Solyc02g090800 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
Solyc06g068830 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.01 Orthogroups_2024-Update
Solyc09g089910 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
Solyc11g042560 No alias Ethylene-responsive transcription factor ERF021 family... 0.02 Orthogroups_2024-Update
Sopen03g036040 No alias AP2 domain 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 32 82
No external refs found!