Sobic.003G324500.1

Description : subgroup ERF-VIII transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.003G324500.1
Cluster	HCAA Clusters: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21042	No alias	ethylene-responsive transcription factor 4	0.02	Orthogroups_2024-Update
At1g75490	No alias	Dehydration-responsive element-binding protein 2D...	0.02	Orthogroups_2024-Update
At2g36450	No alias	Ethylene-responsive transcription factor ERF024...	0.03	Orthogroups_2024-Update
At2g44940	No alias	Ethylene-responsive transcription factor ERF034...	0.03	Orthogroups_2024-Update
Bradi3g50630	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g51630	No alias	C-repeat/DRE binding factor 2	0.01	Orthogroups_2024-Update
Bradi4g35600	No alias	C-repeat/DRE binding factor 1	0.02	Orthogroups_2024-Update
Bradi5g24110	No alias	related to AP2 10	0.02	Orthogroups_2024-Update
Brara.B01950.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.01	Orthogroups_2024-Update
Brara.C01790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.C03348.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.01	Orthogroups_2024-Update
Brara.G00520.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.G03123.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Brara.I00797.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.I05105.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
GRMZM2G106591	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G175543	No alias	ethylene responsive element binding factor 4	0.02	Orthogroups_2024-Update
GRMZM2G466044	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
GRMZM5G837876	No alias	ethylene-responsive element binding factor 15	0.02	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.01	Orthogroups_2024-Update
Glyma.03G112800	No alias	ethylene-responsive element binding factor 13	0.01	Orthogroups_2024-Update
Glyma.03G162700	No alias	ethylene-responsive element binding factor 15	0.02	Orthogroups_2024-Update
Glyma.06G064000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G035000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.08G149200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.12G117000	No alias	erf domain protein 9	0.05	Orthogroups_2024-Update
Glyma.13G152000	No alias	C-repeat-binding factor 4	0.01	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.17G145400	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.20G031000	No alias	related to AP2 11	0.01	Orthogroups_2024-Update
HORVU3Hr1G026970.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
HORVU4Hr1G000700.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU6Hr1G090800.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
LOC_Os02g43790	No alias	ethylene-responsive transcription factor, putative, expressed	0.01	Orthogroups_2024-Update
LOC_Os02g43940	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g54160	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
LOC_Os06g06970	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
MA_10430769g0010	No alias	(at5g25810 : 105.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_10432141g0010	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
MA_10436654g0010	No alias	(at1g74930 : 110.0) encodes a member of the DREB...	0.01	Orthogroups_2024-Update
MA_168025g0010	No alias	(at5g64750 : 115.0) Encodes a putative transcription...	0.05	Orthogroups_2024-Update
MA_203191g0010	No alias	(at1g28360 : 85.9) encodes a member of the ERF (ethylene...	0.01	Orthogroups_2024-Update
MA_2040g0010	No alias	(at5g65130 : 90.5) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_42369g0010	No alias	(at5g07580 : 93.2) encodes a member of the ERF (ethylene...	0.01	Orthogroups_2024-Update
MA_502153g0010	No alias	(at5g44210 : 94.4) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_54341g0010	No alias	(at1g15360 : 131.0) Encodes a member of the ERF...	0.01	Orthogroups_2024-Update
MA_81029g0010	No alias	(q9sxs8\|erf3_tobac : 95.1) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_8984558g0010	No alias	(at1g74930 : 107.0) encodes a member of the DREB...	0.01	Orthogroups_2024-Update
MA_924346g0010	No alias	(at1g77200 : 104.0) encodes a member of the DREB...	0.01	Orthogroups_2024-Update
MA_96512g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_98464g0010	No alias	(at1g78080 : 107.0) Encodes a member of the DREB...	0.01	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00005186-RA	No alias	(at4g17500 : 141.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00056324-RA	No alias	(at5g11590 : 111.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.008G091300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.010G183700	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.010G186400	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.012G134100	No alias	C-repeat-binding factor 4	0.01	Orthogroups_2024-Update
Pp1s126_33V6	No alias	LOC397994; middle molecular weight neurofilament protein...	0.01	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s160_12V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s199_50V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s31_112V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s41_212V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Seita.1G187800.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Seita.4G051200.1	No alias	subgroup ERF-V transcription factor	0.01	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Seita.6G181700.1	No alias	subgroup ERF-X transcription factor	0.01	Orthogroups_2024-Update
Sobic.001G002500.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G225700.1	No alias	subgroup ERF-X transcription factor	0.01	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.01	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Solyc02g077840	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.04	Orthogroups_2024-Update
Solyc05g052410	No alias	Dehydration responsive element binding protein (AHRD...	0.01	Orthogroups_2024-Update
Solyc06g065820	No alias	Ethylene Response Factor H.1	0.02	Orthogroups_2024-Update
Solyc08g080290	No alias	Dehydration responsive element binding transcription...	0.04	Orthogroups_2024-Update
Solyc10g076370	No alias	Dehydration-responsive element binding protein (AHRD...	0.01	Orthogroups_2024-Update
Sopen05g030580	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predicted GO
BP	GO:0006563	L-serine metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016412	serine O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016413	O-acetyltransferase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
BP	GO:0019344	cysteine biosynthetic process	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	29	78

External Links

No external refs found!

Sobic.003G324500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation