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  5. Sobic.003G326700.1

Sobic.003G326700.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G326700.1
Cluster HCAA Clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
163389 No alias O-Glycosyl hydrolases family 17 protein 0.04 Orthogroups_2024-Update
Bradi2g60534 No alias beta-1,3-glucanase 1 0.02 Orthogroups_2024-Update
Bradi2g60536 No alias beta-1,3-glucanase 2 0.02 Orthogroups_2024-Update
Seita.3G263500.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0071897 DNA biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 42 357
No external refs found!