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  5. Sobic.003G331100.1

Sobic.003G331100.1


Description : MYB class-R2R3 subgroup-18 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G331100.1

Target Alias Description ECC score Gene Family Method Actions
At3g08500 No alias Transcription factor MYB83... 0.04 Orthogroups_2024-Update
GRMZM2G159547 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Glyma.17G162100 No alias myb domain protein 79 0.05 Orthogroups_2024-Update
Glyma.18G261400 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
Glyma.19G184500 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
LOC_Os07g48870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_223201g0010 No alias (at4g38620 : 243.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.004G126700 No alias myb domain protein 96 0.02 Orthogroups_2024-Update
Solyc01g094360 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRS4_SALMI) 0.03 Orthogroups_2024-Update
Solyc02g086690 No alias Myb-related protein (AHRD V3.3 *-* A0A0B0P535_GOSAR) 0.02 Orthogroups_2024-Update
Solyc08g065910 No alias blind-like5 0.03 Orthogroups_2024-Update
Solyc11g011050 No alias R2R3MYB transcription factor 43 0.02 Orthogroups_2024-Update
Sopen05g004950 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 100 143
IPR001005 SANT/Myb 47 94
No external refs found!