Description : Unknown function
Gene families : OG_42_0009882 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009882_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.003G334200.1 | |
Cluster | HCAA Clusters: Cluster_89 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc06g009620 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
CC | GO:0019008 | molybdopterin synthase complex | IEP | Predicted GO |
BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Predicted GO |
BP | GO:0051189 | prosthetic group metabolic process | IEP | Predicted GO |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 78 | 105 |
IPR002885 | Pentatricopeptide_repeat | 773 | 798 |
IPR002885 | Pentatricopeptide_repeat | 802 | 830 |
IPR002885 | Pentatricopeptide_repeat | 211 | 236 |
IPR002885 | Pentatricopeptide_repeat | 700 | 728 |
IPR002885 | Pentatricopeptide_repeat | 107 | 136 |
IPR002885 | Pentatricopeptide_repeat | 874 | 897 |
IPR002885 | Pentatricopeptide_repeat | 669 | 697 |
IPR002885 | Pentatricopeptide_repeat | 138 | 167 |
IPR002885 | Pentatricopeptide_repeat | 641 | 664 |
IPR002885 | Pentatricopeptide_repeat | 464 | 513 |
IPR002885 | Pentatricopeptide_repeat | 238 | 285 |
IPR002885 | Pentatricopeptide_repeat | 565 | 612 |
No external refs found! |