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  5. Sobic.003G337600.1

Sobic.003G337600.1


Description : WRKY-type transcription factor


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G337600.1
Cluster HCAA Clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
A4A49_13674 No alias putative wrky transcription factor 48 0.03 Orthogroups_2024-Update
At1g80590 No alias Probable WRKY transcription factor 66... 0.02 Orthogroups_2024-Update
Bradi2g11170 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Bradi2g22440 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Bradi4g01950 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Bradi4g25717 No alias WRKY DNA-binding protein 55 0.03 Orthogroups_2024-Update
Bradi4g30368 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
GRMZM2G304573 No alias WRKY DNA-binding protein 9 0.02 Orthogroups_2024-Update
Glyma.01G053800 No alias WRKY DNA-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.04G061400 No alias WRKY DNA-binding protein 40 0.04 Orthogroups_2024-Update
Glyma.05G160800 No alias WRKY DNA-binding protein 65 0.03 Orthogroups_2024-Update
Glyma.08G018300 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G267400 No alias WRKY DNA-binding protein 70 0.02 Orthogroups_2024-Update
Glyma.16G219800 No alias WRKY DNA-binding protein 70 0.05 Orthogroups_2024-Update
HORVU3Hr1G071750.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G124320.9 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
HORVU7Hr1G049130.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g09080 No alias WRKY107, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g46800 No alias WRKY15, expressed 0.04 Orthogroups_2024-Update
PSME_00008606-RA No alias (at5g56270 : 338.0) WRKY transcription factor 2; WRKY... 0.02 Orthogroups_2024-Update
PSME_00013774-RA No alias (at1g62300 : 180.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
PSME_00047222-RA No alias (at4g04450 : 178.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00053369-RA No alias (at2g34830 : 184.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
Potri.017G104800 No alias WRKY DNA-binding protein 35 0.03 Orthogroups_2024-Update
Seita.5G378000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G013400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g058540 No alias WRKY transcription factor 47 0.03 Orthogroups_2024-Update
Sopen03g025700 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 68 127
No external refs found!