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  5. Sobic.003G342600.2

Sobic.003G342600.2


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G342600.2
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Seita.4G265400.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Solyc12g014260 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.02 Orthogroups_2024-Update
Sopen04g005110 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Sopen06g033590 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Sopen09g033090 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 26 146
No external refs found!