Sobic.003G346000.5


Description : Unknown function


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G346000.5
Cluster HCAA Clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Bradi1g49070 No alias IQ-domain 9 0.01 Orthogroups_2024-Update
Brara.B00074.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.E01017.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G012584 No alias IQ-domain 2 0.02 Orthogroups_2024-Update
LOC_Os06g06160 No alias IQ calmodulin-binding motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
Pp1s19_75V6 No alias T25B15.60; calmodulin-binding family protein... 0.04 Orthogroups_2024-Update
Pp1s421_26V6 No alias T1D16.18; calmodulin-binding family protein [Arabidopsis... 0.02 Orthogroups_2024-Update
Solyc12g014130 No alias SUN-like protein 33 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 139 157
No external refs found!