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  5. Sobic.003G349200.1

Sobic.003G349200.1


Description : manganese cation transporter *(Mn-CDF) & manganese cation transporter *(Mn-CDF)


Gene families : OG_42_0000596 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G349200.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
96683 No alias Cation efflux family protein 0.02 Orthogroups_2024-Update
A4A49_00570 No alias metal tolerance protein 11 0.03 Orthogroups_2024-Update
A4A49_11500 No alias metal tolerance protein 4 0.03 Orthogroups_2024-Update
At2g39450 No alias MTP11 [Source:UniProtKB/TrEMBL;Acc:A0A178VPD8] 0.03 Orthogroups_2024-Update
Bradi2g02050 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Brara.E00624.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update
Brara.G03670.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update
Glyma.14G206600 No alias Cation efflux family protein 0.02 Orthogroups_2024-Update
Glyma.18G286100 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Kfl00343_0090 kfl00343_0090_v1.1 (at1g16310 : 194.0) Cation efflux family protein;... 0.02 Orthogroups_2024-Update
PSME_00043525-RA No alias (at2g39450 : 288.0) Encodes a Golgi-localized manganese... 0.03 Orthogroups_2024-Update
Seita.5G374300.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
MF GO:0008324 cation transmembrane transporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR002524 Cation_efflux 121 314
IPR027470 Cation_efflux_CTD 323 394
No external refs found!