1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G349600.1

Sobic.003G349600.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G349600.1
Cluster HCAA Clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_10804 No alias zinc finger protein zat11 0.03 Orthogroups_2024-Update
At2g28200 No alias Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4] 0.02 Orthogroups_2024-Update
Bradi1g16010 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
Brara.C01069.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G069176 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
GRMZM2G140299 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.02G094500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G059700 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Seita.3G369200.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G359300.2 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sopen05g033130 No alias C2H2-type zinc finger 0.03 Orthogroups_2024-Update
Sopen06g032200 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!