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  5. Sobic.003G350900.1

Sobic.003G350900.1


Description : WOX-type transcription factor


Gene families : OG_42_0000667 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000667_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G350900.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Brara.B00187.1 No alias WOX-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E01873.1 No alias WOX-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J02640.1 No alias WOX-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.04G040900 No alias WUSCHEL related homeobox 4 0.04 Orthogroups_2024-Update
Glyma.07G131000 No alias WUSCHEL related homeobox 1 0.02 Orthogroups_2024-Update
Glyma.07G219400 No alias WUSCHEL related homeobox 1 0.03 Orthogroups_2024-Update
PSME_00047765-RA No alias (at1g46480 : 131.0) Encodes a WUSCHEL-related homeobox... 0.03 Orthogroups_2024-Update
Potri.010G111400 No alias WUSCHEL related homeobox 1 0.03 Orthogroups_2024-Update
Sopen02g028730 No alias Homeobox domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 46 105
No external refs found!