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  5. Sobic.003G353500.1

Sobic.003G353500.1


Description : A1-class (Pepsin) protease & regulatory factor *(PCS1) of tapetal programmed cell death


Gene families : OG_42_0002988 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G353500.1
Cluster HCAA Clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
MA_492535g0010 No alias (at5g02190 : 245.0) encodes an aspartic protease, has an... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 262 428
IPR032861 TAXi_N 65 235
No external refs found!