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  5. Sobic.003G355300.1

Sobic.003G355300.1


Description : Unknown function


Gene families : OG_42_0000550 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G355300.1
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
At3g23200 No alias CASP-like protein 5B3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7R5] 0.04 Orthogroups_2024-Update
Brara.A00183.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G102400 No alias Uncharacterised protein family (UPF0497) 0.05 Orthogroups_2024-Update
Glyma.03G067100 No alias Uncharacterised protein family (UPF0497) 0.12 Orthogroups_2024-Update
Glyma.10G187800 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
HORVU3Hr1G085820.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G099690.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Pp1s214_33V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G219300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g089850 No alias CASP-like protein (AHRD V3.3 *** K4CW11_SOLLC) 0.04 Orthogroups_2024-Update
Sopen09g005980 No alias Domain of unknown function (DUF588) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 7 137
No external refs found!