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  5. Sobic.003G363900.1

Sobic.003G363900.1


Description : acidic chitinase *(CHIA)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G363900.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_40427 No alias hevamine-a 0.02 Orthogroups_2024-Update
Brara.I00586.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
LOC_Os01g47070 No alias glycosyl hydrolase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g64100 No alias glycosyl hydrolase, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g03650.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 Orthogroups_2024-Update
Potri.014G091600 No alias chitinase A 0.02 Orthogroups_2024-Update
Solyc01g095250 No alias Acidic endochitinase (AHRD V3.3 *** W9R015_9ROSA) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 30 287
No external refs found!