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  5. Sobic.003G364300.1

Sobic.003G364300.1


Description : acidic chitinase *(CHIA)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G364300.1
Cluster HCAA Clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G299700 No alias chitinase A 0.06 Orthogroups_2024-Update
Glyma.20G164900 No alias chitinase A 0.03 Orthogroups_2024-Update
Mp2g03650.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 Orthogroups_2024-Update
Potri.014G091600 No alias chitinase A 0.02 Orthogroups_2024-Update
Seita.9G578100.1 No alias acidic chitinase *(CHIA) 0.06 Orthogroups_2024-Update
Solyc01g095260 No alias Acidic endochitinase (AHRD V3.3 *** W9R015_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 33 290
No external refs found!