1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G368100.2

Sobic.003G368100.2


Description : hydroxycinnamoyl-CoA acyltransferase & EC_2.3 acyltransferase


Gene families : OG_42_0000118 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G368100.2
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G167600 No alias HXXXD-type acyl-transferase family protein 0.02 Orthogroups_2024-Update
Glyma.18G104100 No alias spermidine hydroxycinnamoyl transferase 0.02 Orthogroups_2024-Update
Glyma.18G166000 No alias HXXXD-type acyl-transferase family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G118090.4 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00055401-RA No alias (at5g41040 : 493.0) Encodes a feruloyl-CoA transferase... 0.03 Orthogroups_2024-Update
PSME_00056016-RA No alias (at5g48930 : 649.0) At5g48930 has been shown to encode... 0.03 Orthogroups_2024-Update
Potri.018G105400 No alias hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl... 0.03 Orthogroups_2024-Update
Potri.018G105500 No alias hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl... 0.02 Orthogroups_2024-Update
Sobic.003G408900.1 No alias hydroxycinnamoyl-CoA acyltransferase & EC_2.3 acyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!