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  5. Sobic.003G380900.1

Sobic.003G380900.1


Description : subgroup ERF-II transcription factor *(ERF19/20)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G380900.1
Cluster HCAA Clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
92334 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.02 Orthogroups_2024-Update
At2g20880 No alias Ethylene-responsive transcription factor ERF053... 0.03 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.03 Orthogroups_2024-Update
Brara.G02253.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.G03313.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
GRMZM2G061487 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G298600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
MA_10031781g0010 No alias (at5g51190 : 100.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
MA_2040g0010 No alias (at5g65130 : 90.5) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_28894g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_37766g0010 No alias (at3g14230 : 132.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
MA_8384767g0010 No alias (at1g33760 : 124.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00026873-RA No alias (at5g11590 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00048384-RA No alias (at5g11190 : 113.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G157100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G080600 No alias ethylene responsive element binding factor 6 0.03 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s259_94V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s25_13V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.02 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.05 Orthogroups_2024-Update
Seita.2G430400.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Seita.7G205100.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.06 Orthogroups_2024-Update
Sobic.007G188701.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G071700.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Solyc01g090310 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc03g118190 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.03 Orthogroups_2024-Update
Sopen00g003270 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 21 70
No external refs found!