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  5. Sobic.003G383700.1

Sobic.003G383700.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G383700.1

Target Alias Description ECC score Gene Family Method Actions
A4A49_10474 No alias lob domain-containing protein 25 0.11 Orthogroups_2024-Update
A4A49_32358 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
At1g31320 No alias LOB domain-containing protein 4... 0.03 Orthogroups_2024-Update
At2g30130 No alias PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1] 0.02 Orthogroups_2024-Update
Bradi1g65760 No alias LOB domain-containing protein 1 0.01 Orthogroups_2024-Update
Brara.E01292.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F00482.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G079185 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
GRMZM2G447176 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
Glyma.06G145400 No alias LOB domain-containing protein 15 0.04 Orthogroups_2024-Update
Glyma.06G178900 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Glyma.15G258100 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
HORVU3Hr1G016690.1 No alias AS2/LOB-type transcription factor 0.01 Orthogroups_2024-Update
LOC_Os01g60960 No alias DUF260 domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g34450 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00048913-RA No alias (at2g28500 : 129.0) LOB domain-containing protein 11... 0.01 Orthogroups_2024-Update
Potri.003G039700 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Potri.014G167100 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Pp1s238_53V6 No alias T19E23.11; LOB domain protein 4 / lateral organ... 0.04 Orthogroups_2024-Update
Seita.3G045800.1 No alias AS2/LOB-type transcription factor 0.01 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Sopen02g031200 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 106 202
No external refs found!