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  5. Sobic.003G389100.2

Sobic.003G389100.2


Description : group-I formin actin filament elongation factor


Gene families : OG_42_0000265 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G389100.2
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_13077 No alias formin-like protein 1 0.02 Orthogroups_2024-Update
At3g25500 No alias Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1] 0.03 Orthogroups_2024-Update
Brara.A02008.1 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
Brara.F03012.1 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
GRMZM2G040965 No alias formin homology 1 0.03 Orthogroups_2024-Update
Glyma.05G105100 No alias formin homolog 6 0.04 Orthogroups_2024-Update
Glyma.06G187100 No alias formin 8 0.05 Orthogroups_2024-Update
Glyma.10G152300 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G043830.9 No alias group-I formin actin filament elongation factor 0.05 Orthogroups_2024-Update
HORVU2Hr1G080560.3 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
LOC_Os03g10680 No alias formin-like protein 6 precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g39920 No alias formin, putative, expressed 0.03 Orthogroups_2024-Update
MA_809393g0010 No alias (at5g67470 : 291.0) formin homolog 6 (FH6); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00041373-RA No alias (at3g25500 : 169.0) Poly-L-proline-containing (PLP)... 0.02 Orthogroups_2024-Update
Potri.008G192900 No alias formin 8 0.02 Orthogroups_2024-Update
Sobic.004G244300.1 No alias group-I formin actin filament elongation factor 0.04 Orthogroups_2024-Update
Solyc01g099650 No alias Formin-like protein (AHRD V3.3 *** K4B0Z9_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g042740 No alias Formin-like protein (AHRD V3.3 *** K4CSX6_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 481 883
No external refs found!