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  5. At3g53170

At3g53170


Description : LOW protein: PPR containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNX7]


Gene families : OG_42_0001418 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g53170
Cluster HCCA clusters: Cluster_13


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 355 403
IPR002885 Pentatricopeptide_repeat 426 471
IPR002885 Pentatricopeptide_repeat 177 227
IPR002885 Pentatricopeptide_repeat 251 280
IPR002885 Pentatricopeptide_repeat 288 317
IPR002885 Pentatricopeptide_repeat 146 175
IPR002885 Pentatricopeptide_repeat 323 350
No external refs found!