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At3g53230


Description : Cell division control protein 48 homolog D [Source:UniProtKB/Swiss-Prot;Acc:Q9SCN8]


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g53230
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
145748 No alias ATPase, AAA-type, CDC48 protein 0.04 Orthogroups_2024-Update
At3g09840 No alias AT3G09840 protein [Source:UniProtKB/TrEMBL;Acc:B9DI55] 0.04 Orthogroups_2024-Update
Brara.C01596.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
HORVU1Hr1G060370.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
HORVU4Hr1G072010.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
Sopen03g031660 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update
Sopen10g033500 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 518 651
IPR003959 ATPase_AAA_core 245 374
IPR003338 CDC4_N-term_subdom 30 111
IPR004201 Cdc48_dom2 132 195
No external refs found!